Open Source Contributions

This page just lists various contributions I’ve made to Open Source Software over the years. It’s not a definitive list, but the aim is to round up the highlights all in one place:

Data Science / Bioinformatics

• CountESS

  • Principal Developer

• DuckDB

  • issues
  • PRs
  • duckdb-compression extension

• biobear

  • PR

• gene normalizer

  • PR

Embedded Systems

• MicroPython

  I did a talk about MicroPython back at PyConAU 2016 and bunch of work to get the initial ESP32 port under way … also some little stuff like testing the Ethernet PHY support.

  Also some little utilities:

  • mpy-tut
  • mpy-utils
  • mpy-webpad

• CircuitPython

  I also did some contract work for Adafruit on their fork of MicroPython:

  • CircuitPython

3d Modeling

• OpenSCAD

  • Filling holes in 2D shapes

Bad Ideas But Maybe They Contribute To The Conversation

• Tranquil APIs
• Web server in SQL
• Compiling Python to JS
• A weird templating language
• 512 distinct words
• Python Coroutine Server
• Some old packet radio stuff
• Web Abstact Syntax Tree Editor